244 Commits (9de00878ace2dc17a2b6ded3964fa31ce73ca74f)
 

Author SHA1 Message Date
  C. J. Howard 9de00878ac Move components and systems to ecs namespace 3 years ago
  C. J. Howard b30150d5ca Disable Doxygentree treeview and add custom header, footer, and style files 3 years ago
  C. J. Howard 732dca075d Enable SOURCE_BROWSER in Doxyfile 3 years ago
  C. J. Howard 978ad7add6 Rename scene class to collection and move all scene-related classes into the scene namespace 3 years ago
  C. J. Howard a5318aa30a Change HTML formula format to SVG 3 years ago
  C. J. Howard 36597c8fa0 Change dot graph format to SVG 3 years ago
  C. J. Howard 9def749e10 Disable EXTRACT_LOCAL_CLASSES in Doxyfile 3 years ago
  C. J. Howard 5a3dc5ede2 Enable GROUP_NESTED_COMPOUNDS in Doxyfile 3 years ago
  C. J. Howard 191fbf0243 Add version number to Doxyfile 3 years ago
  C. J. Howard 5e7ddbe11d Disable FULL_PATH_NAMES in Doxyfile 3 years ago
  C. J. Howard 991baf9b51 Add UI namespace 3 years ago
  C. J. Howard 1a191bb2f7 Turn on DISTRIBUTE_GROUP_DOC in Doxyfile 3 years ago
  C. J. Howard b442b10ba3 Document undocumented cli function 3 years ago
  C. J. Howard 692d0f71ee Move code in debug folder into new debug namespace 3 years ago
  C. J. Howard 461e864c49 Move genetics folder out of game folder, document subnamespaces of genetics namespace, move genetics::translation_table to genetics::codon::table 3 years ago
  C. J. Howard 5beb18df8d Fix typo 3 years ago
  C. J. Howard f4f180d5f1 Document genetics namespace and revise math namespace 3 years ago
  C. J. Howard 2c4e237276 Update copyright date 3 years ago
  C. J. Howard e16de75386 Add solar system 3 years ago
  C. J. Howard 91ed4912ba Update links in README.md 3 years ago
  C. J. Howard 501abc96c0 Add documentation link to README.md 3 years ago
  C. J. Howard a8c8600afa Enable JAVADOC_AUTOBRIEF in Doxyfile 3 years ago
  C. J. Howard dc461206b0 Enable EXTRACT_ALL in Doxyfile 3 years ago
  C. J. Howard aabb5f1670 Tweak Doxygen configuration 3 years ago
  C. J. Howard 9a28254cbc Add Doxyfile 3 years ago
  C. J. Howard 7103f6a953 Update README.md 3 years ago
  C. J. Howard 6f06076bdc Update repo URLS in README.md 3 years ago
  C. J. Howard 3646ca1180 Update links in README.md 3 years ago
  C. J. Howard 64131116ff Add function for calculating the percent similarity between two proteins 3 years ago
  C. J. Howard af8b516e7a Document genetics::protein::identity function 3 years ago
  C. J. Howard ae2d1168e4 Add scoring matrices and functions 3 years ago
  C. J. Howard 0694235553 Fix swapped DNA and RNA base complements 3 years ago
  C. J. Howard 4760fc1920 Rename dna namespace to genetics, and revise genetic algorithms 3 years ago
  C. J. Howard 73fefea5c6 Add transcribe function 3 years ago
  C. J. Howard 8f943ff4ad Add nucleobase functions 3 years ago
  C. J. Howard eea8665dcd Add DNA transcription functions 3 years ago
  C. J. Howard b6947b3842 Add functions for finding start and stop codons 3 years ago
  C. J. Howard 0f9e295775 Add dna translation function 3 years ago
  C. J. Howard 2037230060 Finish documenting and organizing bitwise functions in bit-math.hpp 3 years ago
  C. J. Howard 3499e526e8 Generalize genetic operators to work with iterators, add more functions to bit-math.hpp 3 years ago
  C. J. Howard 10fd5f6801 Move bit math to utility folder and enclose in bit namespace 3 years ago
  C. J. Howard dbbcf493c8 Improve bitwise genetic functions 3 years ago
  C. J. Howard 72f4ab9bda Improve crossover function, add crossover_n, add more bit math utilities, add inherit function 3 years ago
  C. J. Howard ecc2b47a30 Add bit-math.hpp 3 years ago
  C. J. Howard 541754d57b Refine and optimize genetic operators 3 years ago
  C. J. Howard 747b857273 Revise zygosity functions 3 years ago
  C. J. Howard dfa79ca1a3 Add popcount function 3 years ago
  C. J. Howard cd450aa3d5 Add crossover and mutate genetic operators 3 years ago
  C. J. Howard d4c162c1e0 Add initial genetics code 3 years ago
  C. J. Howard 08b909e49a Add apparent size function 3 years ago