@ -0,0 +1,38 @@ | |||
/* | |||
* Copyright (C) 2020 Christopher J. Howard | |||
* | |||
* This file is part of Antkeeper source code. | |||
* | |||
* Antkeeper source code is free software: you can redistribute it and/or modify | |||
* it under the terms of the GNU General Public License as published by | |||
* the Free Software Foundation, either version 3 of the License, or | |||
* (at your option) any later version. | |||
* | |||
* Antkeeper source code is distributed in the hope that it will be useful, | |||
* but WITHOUT ANY WARRANTY; without even the implied warranty of | |||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |||
* GNU General Public License for more details. | |||
* | |||
* You should have received a copy of the GNU General Public License | |||
* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>. | |||
*/ | |||
#ifndef ANTKEEPER_ALLELE_HPP | |||
#define ANTKEEPER_ALLELE_HPP | |||
namespace dna | |||
{ | |||
/// Enumerates allele types. | |||
enum class allele: bool | |||
{ | |||
/// Indicates an allele is recessive. | |||
recessive = false, | |||
/// Indicates an allele is dominant. | |||
dominant = true | |||
}; | |||
} // namespace dna | |||
#endif // ANTKEEPER_ALLELE_HPP |
@ -0,0 +1,33 @@ | |||
/* | |||
* Copyright (C) 2020 Christopher J. Howard | |||
* | |||
* This file is part of Antkeeper source code. | |||
* | |||
* Antkeeper source code is free software: you can redistribute it and/or modify | |||
* it under the terms of the GNU General Public License as published by | |||
* the Free Software Foundation, either version 3 of the License, or | |||
* (at your option) any later version. | |||
* | |||
* Antkeeper source code is distributed in the hope that it will be useful, | |||
* but WITHOUT ANY WARRANTY; without even the implied warranty of | |||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |||
* GNU General Public License for more details. | |||
* | |||
* You should have received a copy of the GNU General Public License | |||
* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>. | |||
*/ | |||
#ifndef ANTKEEPER_GENE_HPP | |||
#define ANTKEEPER_GENE_HPP | |||
#include "allele.hpp" | |||
namespace dna | |||
{ | |||
/// A gene with two alleles. | |||
typedef std::array<allele, 2> gene; | |||
} // namespace dna | |||
#endif // ANTKEEPER_GENE_HPP |
@ -0,0 +1,68 @@ | |||
/* | |||
* Copyright (C) 2020 Christopher J. Howard | |||
* | |||
* This file is part of Antkeeper source code. | |||
* | |||
* Antkeeper source code is free software: you can redistribute it and/or modify | |||
* it under the terms of the GNU General Public License as published by | |||
* the Free Software Foundation, either version 3 of the License, or | |||
* (at your option) any later version. | |||
* | |||
* Antkeeper source code is distributed in the hope that it will be useful, | |||
* but WITHOUT ANY WARRANTY; without even the implied warranty of | |||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |||
* GNU General Public License for more details. | |||
* | |||
* You should have received a copy of the GNU General Public License | |||
* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>. | |||
*/ | |||
#ifndef ANTKEEPER_ZYGOSITY_HPP | |||
#define ANTKEEPER_ZYGOSITY_HPP | |||
#include "gene.hpp" | |||
namespace dna | |||
{ | |||
/// A homozygous recessive gene. | |||
static constexpr gene homozygous_recessive = {allele::recessive, allele::recessive}; | |||
/// A homozygous dominant gene. | |||
static constexpr gene homozygous_dominant = {allele::recessive, allele::recessive}; | |||
/// Returns `true` if gene @p x is heterozygous, `false` otherwise. | |||
bool is_heterozygous(const gene& x); | |||
/// Returns `true` if gene @p x is homozygous, `false` otherwise. | |||
bool is_homozygous(const gene& x); | |||
/// Returns `true` if gene @p x is homozygous recessive, `false` otherwise. | |||
bool is_homozygous_recessive(const gene& x); | |||
/// Returns `true` if gene @p x is homozygous dominant, `false` otherwise. | |||
bool is_homozygous_dominant(const gene& x); | |||
inline bool is_heterozygous(const gene& x) | |||
{ | |||
return x[0] != x[1]; | |||
} | |||
inline bool is_homozygous(const gene& x) | |||
{ | |||
return x[0] == x[1]; | |||
} | |||
inline bool is_homozygous_recessive(const gene& x) | |||
{ | |||
return x == homozygous_recessive; | |||
} | |||
inline bool is_homozygous_dominant(const gene& x) | |||
{ | |||
return x == homozygous_dominant; | |||
} | |||
} // namespace dna | |||
#endif // ANTKEEPER_ZYGOSITY_HPP |