@ -0,0 +1,38 @@ | |||||
/* | |||||
* Copyright (C) 2020 Christopher J. Howard | |||||
* | |||||
* This file is part of Antkeeper source code. | |||||
* | |||||
* Antkeeper source code is free software: you can redistribute it and/or modify | |||||
* it under the terms of the GNU General Public License as published by | |||||
* the Free Software Foundation, either version 3 of the License, or | |||||
* (at your option) any later version. | |||||
* | |||||
* Antkeeper source code is distributed in the hope that it will be useful, | |||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of | |||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |||||
* GNU General Public License for more details. | |||||
* | |||||
* You should have received a copy of the GNU General Public License | |||||
* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>. | |||||
*/ | |||||
#ifndef ANTKEEPER_ALLELE_HPP | |||||
#define ANTKEEPER_ALLELE_HPP | |||||
namespace dna | |||||
{ | |||||
/// Enumerates allele types. | |||||
enum class allele: bool | |||||
{ | |||||
/// Indicates an allele is recessive. | |||||
recessive = false, | |||||
/// Indicates an allele is dominant. | |||||
dominant = true | |||||
}; | |||||
} // namespace dna | |||||
#endif // ANTKEEPER_ALLELE_HPP |
@ -0,0 +1,33 @@ | |||||
/* | |||||
* Copyright (C) 2020 Christopher J. Howard | |||||
* | |||||
* This file is part of Antkeeper source code. | |||||
* | |||||
* Antkeeper source code is free software: you can redistribute it and/or modify | |||||
* it under the terms of the GNU General Public License as published by | |||||
* the Free Software Foundation, either version 3 of the License, or | |||||
* (at your option) any later version. | |||||
* | |||||
* Antkeeper source code is distributed in the hope that it will be useful, | |||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of | |||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |||||
* GNU General Public License for more details. | |||||
* | |||||
* You should have received a copy of the GNU General Public License | |||||
* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>. | |||||
*/ | |||||
#ifndef ANTKEEPER_GENE_HPP | |||||
#define ANTKEEPER_GENE_HPP | |||||
#include "allele.hpp" | |||||
namespace dna | |||||
{ | |||||
/// A gene with two alleles. | |||||
typedef std::array<allele, 2> gene; | |||||
} // namespace dna | |||||
#endif // ANTKEEPER_GENE_HPP |
@ -0,0 +1,68 @@ | |||||
/* | |||||
* Copyright (C) 2020 Christopher J. Howard | |||||
* | |||||
* This file is part of Antkeeper source code. | |||||
* | |||||
* Antkeeper source code is free software: you can redistribute it and/or modify | |||||
* it under the terms of the GNU General Public License as published by | |||||
* the Free Software Foundation, either version 3 of the License, or | |||||
* (at your option) any later version. | |||||
* | |||||
* Antkeeper source code is distributed in the hope that it will be useful, | |||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of | |||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |||||
* GNU General Public License for more details. | |||||
* | |||||
* You should have received a copy of the GNU General Public License | |||||
* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>. | |||||
*/ | |||||
#ifndef ANTKEEPER_ZYGOSITY_HPP | |||||
#define ANTKEEPER_ZYGOSITY_HPP | |||||
#include "gene.hpp" | |||||
namespace dna | |||||
{ | |||||
/// A homozygous recessive gene. | |||||
static constexpr gene homozygous_recessive = {allele::recessive, allele::recessive}; | |||||
/// A homozygous dominant gene. | |||||
static constexpr gene homozygous_dominant = {allele::recessive, allele::recessive}; | |||||
/// Returns `true` if gene @p x is heterozygous, `false` otherwise. | |||||
bool is_heterozygous(const gene& x); | |||||
/// Returns `true` if gene @p x is homozygous, `false` otherwise. | |||||
bool is_homozygous(const gene& x); | |||||
/// Returns `true` if gene @p x is homozygous recessive, `false` otherwise. | |||||
bool is_homozygous_recessive(const gene& x); | |||||
/// Returns `true` if gene @p x is homozygous dominant, `false` otherwise. | |||||
bool is_homozygous_dominant(const gene& x); | |||||
inline bool is_heterozygous(const gene& x) | |||||
{ | |||||
return x[0] != x[1]; | |||||
} | |||||
inline bool is_homozygous(const gene& x) | |||||
{ | |||||
return x[0] == x[1]; | |||||
} | |||||
inline bool is_homozygous_recessive(const gene& x) | |||||
{ | |||||
return x == homozygous_recessive; | |||||
} | |||||
inline bool is_homozygous_dominant(const gene& x) | |||||
{ | |||||
return x == homozygous_dominant; | |||||
} | |||||
} // namespace dna | |||||
#endif // ANTKEEPER_ZYGOSITY_HPP |