💿🐜 Antkeeper source code
https://antkeeper.com
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48 lines
1.6 KiB
48 lines
1.6 KiB
/*
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* Copyright (C) 2020 Christopher J. Howard
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*
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* This file is part of Antkeeper source code.
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*
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* Antkeeper source code is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* Antkeeper source code is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with Antkeeper source code. If not, see <http://www.gnu.org/licenses/>.
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*/
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#ifndef ANTKEEPER_GENETICS_TRANSLATION_TABLE_HPP
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#define ANTKEEPER_GENETICS_TRANSLATION_TABLE_HPP
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namespace genetics {
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/**
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* Genetic code translation table.
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*
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* @see https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi
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*/
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struct translation_table
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{
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/// String of 64 IUPAC amino acid base symbols, in TCAG order.
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const char* aas;
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/// String of 64 IUPAC amino acid base symbols, in TCAG order, where symbols other than `-` and `*` indicate a start codon and its amino acid.
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const char* starts;
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};
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/// Translation table for standard genetic code.
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constexpr translation_table standard_code =
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{
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"FFLLSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
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"---M------**--*----M---------------M----------------------------",
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};
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} // namespace genetics
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#endif // ANTKEEPER_GENETICS_TRANSLATION_TABLE_HPP
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